Protein ZmTRAF14 | |
---|---|
Information | |
Coreg Name: | ZmTRAF14 |
Species: | Maize |
Coreg Family: | TRAF |
Gene Name(Synonym): | MAB22 |
Uniprot ID: | K7TN92 |
ZmTRAF14 is a protein in the TRAF family.
Overview of domains present in v5 transcripts | |
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PF00651 | |
Zm00001eb409490_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d023740 | DAPseq | sequence | fimo | position | |
Zm00001d023740 | DAPseq | sequence | fimo | position | |
Zm00001d023740 | ChIPseq | sequence | fimo | position | |
Zm00001d023740 | PChIPseq | sequence | fimo | position |
MTHTCTHLIANVCSVHRLKVDDFCVTKSTIRNKKDCCIRSRCSVDGYDWEIQFRFSPYEGSPEDYWLALVLVYLGAPCDG
GVAVALSCHLVDQSCDLRVPLLTTTQGLNTTFRRPLDRSPPIYFGKGKVRDDVQAAAAAGRPLIFKGGSFTVECQIDVHS
SRDSDSVSLPSSDLHQHLGELLRNQSGADVTFIVSGESIAAHKSILAARSPIFMAQFFGNMLERGSQCVEIQDMHPAVFK
AMLHYIYTDTVPDLGTDTTTVEETAVMAQHLLVAADMYALDRLKEICEERLTRGIGIGTVASTLALADQHNLAQLKAKCI
DFITGGSSKNLLAVLETEGYRHLEASNPSVLTELVMAAHGKKRKRLYG
MTHTCTHLIANVCSVHRLKVDDFCVTKSTIRNKKDCCIRSRCSVDGYDWEIQFRFSPYEGSPEDYWLALVLVYLGAPCDG
GVAVALSCHLVDQSCDLRVPLLTTTQGLNTTFRRPLDRSPPIYFGKGKVRDDVQAAAAAGRPLIFKGGSFTVECQIDVHS
SRDSDSVSLPSSDLHQHLGELLRNQSGADVTFIVSGESIAAHKSILAARSPIFMAQFFGNMLERGSQCVEIQDMHPAVFK
AMLHYIYTDTVPDLGTDTTTVEETAVMAQHLLVAADMYALDRLKEICEERLTRGIGIGTVASTLALADQHNLAQLKAKCI
DFITGGSSKNLLAVLETEGYRHLEASNPSVLTELVMAAHGKKRKRLYG
MTHTCTHLIANVCSVHRLKVDDFCVTKSTIRNKKDCCIRSRCSVDGYDWEIQFRFSPYEGSPEDYWLALVLVYLGAPCDG
GVAVALSCHLVDQSCDLRVPLLTTTQGLNTTFRRPLDRSPPIYFGKGKVRDDVQAAAAAGRPLIFKGGSFTVECQIDVHS
SRDSDSVSLPSSDLHQHLGELLRNQSGADVTFIVSGESIAAHKSILAARSPIFMAQFFGNMLERGSQCVEIQDMHPAVFK
AMLHYIYTDTVPDLGTDTTTVEETAVMAQHLLVAADMYALDRLKEICEERLTRGIGIGTVASTLALADQHNLAQLKAKCI
DFITGGSSKNLLAVLETEGYRHLEASNPSVLTELVMAAHGKKRKRLYG
MTHTCTHLIANVCSVHRLKVDDFCVTKSTIRNKKDCCIRSRCSVDGYDWEIQFRFSPYEGSPEDYWLALVLVYLGAPCDG
GVAVALSCHLVDQSCDLRVPLLTTTQGLNTTFRRPLDRSPPIYFGKGKVRDDVQAAAAAGRPLIFKGGSFTVECQIDVHS
SRDSDSVSLPSSDLHQHLGELLRNQSGADVTFIVSGESIAAHKSILAARSPIFMAQFFGNMLERGSQCVEIQDMHPAVFK
AMLHYIYTDTVPDLGTDTTTVEETAVMAQHLLVAADMYALDRLKEICEERLTRGIGIGTVASTLALADQHNLAQLKAKCI
DFITGGSSKNLLAVLETEGYRHLEASNPSVLTELVMAAHGKKRKRLYG
MTHTCTHLIANVCSVHRLKVDDFCVTKSTIRNKKDCCIRSRCSVDGYDWEIQFRFSPYEGSPEDYWLALVLVYLGAPCDG
GVAVALSCHLVDQSCDLRVPLLTTTQGLNTTFRRPLDRSPPIYFGKGKVRDDVQAAAAAGRPLIFKGGSFTVECQIDVHS
SRDSDSVSLPSSDLHQHLGELLRNQSGADVTFIVSGESIAAHKSILAARSPIFMAQFFGNMLERGSQCVEIQDMHPAVFK
AMLHYIYTDTVPDLGTDTTTVEETAVMAQHLLVAADMYALDRLKEICEERLTRGIGIGTVASTLALADQHNLAQLKAKCI
DFITGGSSKNLLAVLETEGYRHLEASNPSVLTELVMAAHGKKRKRLYG
MTHTCTHLIANVCSVHRLKVDDFCVTKSTIRNKKDCCIRSRCSVDGYDWEIQFRFSPYEGSPEDYWLALVLVYLGAPCDG
GVAVALSCHLVDQSCDLRVPLLTTTQGLNTTFRRPLDRSPPIYFGKGKVRDDVQAAAAAGRPLIFKGGSFTVECQIDVHS
SRDSDSVSLPSSDLHQHLGELLRNQSGADVTFIVSGESIAAHKSILAARSPIFMAQFFGNMLERGSQCVEIQDMHPAVFK
AMLHYIYTDTVPDLGTDTTTVEETAVMAQHLLVAADMYALDRLKEICEERLTRGIGIGTVASTLALADQHNLAQLKAKCI
DFITGGSSKNLLAVLETEGYRHLEASNPSVLTELVMAAHGKKRKRLYG
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
---|---|
PF00651 |
|
PF00651 |
|
Hover here to show all domains |
TCTGCTCCCCCGTCGTTCTCCGATC...
TCTGCTCCCCCGTCGTTCTCCGATCCCTGAGCGGCGGCCGTCTCGCTTGCGCTCTGACTCCGACCGATCTGACCGGCGGCCATCTCGCCACTGGCCACGGCGCGTCCTCCGCGGCAAGTTCTTCCAGGTCAGAGATTCAGGCTAGGGCTCAACCGTGATGACGCACACCTGCACTCACCTCATCGCGAATGTCTGCTCAGTGCACCGTCTCAAGGTAGATGACTTCTGTGTCACCAAGTCCACGATCAGGAACAAGAAGGATTGCTGCATCAGATCCAGATGCAGCGTCGACGGATACGACTGGGAGATCCAGTTCCGCTTTTCACCTTACGAGGGCAGTCCTGAAGACTACTGGTTAGCGCTCGTGCTTGTGTACCTCGGCGCGCCGTGCGACGGCGGTGTGGCGGTGGCTCTGAGCTGTCATCTGGTAGATCAGAGCTGCGATCTTCGTGTTCCATTATTAACAACAACACAAGGTCTAAACACAACGTTTAGGCGTCCCTTGGACCGCTCTCCTCCGATTTACTTCGGCAAAGGGAAGGTTAGAGACGATGTGCAGGCAGCAGCAGCAGCTGGTCGCCCGCTAATATTCAAGGGTGGTTCATTTACTGTGGAATGCCAGATCGACGTGCACAGCAGCAGGGACTCAGATTCCGTTTCTCTGCCGTCCTCTGACCTGCACCAACACCTCGGGGAGCTCTTGCGGAACCAGTCTGGTGCAGACGTTACCTTCATCGTTTCCGGTGAGTCCATCGCAGCACACAAGAGCATACTAGCCGCAAGGTCCCCGATCTTCATGGCCCAGTTCTTTGGCAACATGCTGGAGAGGGGCTCCCAGTGCGTGGAGATCCAGGACATGCACCCGGCCGTGTTCAAGGCCATGCTTCACTACATCTACACTGACACAGTGCCTGACCTTGGTACTGATACCACCACGGTCGAGGAGACGGCGGTGATGGCTCAGCACCTGCTTGTAGCTGCCGACATGTATGCGCTAGACAGGCTCAAGGAGATCTGCGAGGAAAGGCTCACCCGTGGCATCGGCATTGGCACGGTGGCGTCGACGCTGGCTCTAGCAGACCAGCACAACTTGGCCCAGCTCAAGGCTAAGTGCATCGACTTCATCACTGGAGGATCCAGTAAAAATCTTCTAGCCGTCTTGGAGACGGAAGGGTACAGGCATCTGGAGGCCAGCAACCCCTCGGTGTTGACGGAGCTCGTCATGGCTGCGCATGGAAAAAAGAGGAAACGATTATACGGGTAGATTCTTGAATTAGAATGGCGCATATATGGCCTGCTGCTGAGGATAATATATTATGTTCAGCCTTAATAATTTCACTCTGTATATACTATTGTTATCGTGACCAACTATAATTTGCTTGCATTTCCG
MTHTCTHLIANVCSVHRLKVDDFCVTKSTIRNKKDCCIRSRCSVDGYDWEIQFRFSPYEGSPEDYWLALVLVYLGAPCDG
GVAVALSCHLVDQSCDLRVPLLTTTQGLNTTFRRPLDRSPPIYFGKGKVRDDVQAAAAAGRPLIFKGGSFTVECQIDVHS
SRDSDSVSLPSSDLHQHLGELLRNQSGADVTFIVSGESIAAHKSILAARSPIFMAQFFGNMLERGSQCVEIQDMHPAVFK
AMLHYIYTDTVPDLGTDTTTVEETAVMAQHLLVAADMYALDRLKEICEERLTRGIGIGTVASTLALADQHNLAQLKAKCI
DFITGGSSKNLLAVLETEGYRHLEASNPSVLTELVMAAHGKKRKRLYG
ATGACGCACACCTGCACTCACCTCA...
ATGACGCACACCTGCACTCACCTCATCGCGAATGTCTGCTCAGTGCACCGTCTCAAGGTAGATGACTTCTGTGTCACCAAGTCCACGATCAGGAACAAGAAGGATTGCTGCATCAGATCCAGATGCAGCGTCGACGGATACGACTGGGAGATCCAGTTCCGCTTTTCACCTTACGAGGGCAGTCCTGAAGACTACTGGTTAGCGCTCGTGCTTGTGTACCTCGGCGCGCCGTGCGACGGCGGTGTGGCGGTGGCTCTGAGCTGTCATCTGGTAGATCAGAGCTGCGATCTTCGTGTTCCATTATTAACAACAACACAAGGTCTAAACACAACGTTTAGGCGTCCCTTGGACCGCTCTCCTCCGATTTACTTCGGCAAAGGGAAGGTTAGAGACGATGTGCAGGCAGCAGCAGCAGCTGGTCGCCCGCTAATATTCAAGGGTGGTTCATTTACTGTGGAATGCCAGATCGACGTGCACAGCAGCAGGGACTCAGATTCCGTTTCTCTGCCGTCCTCTGACCTGCACCAACACCTCGGGGAGCTCTTGCGGAACCAGTCTGGTGCAGACGTTACCTTCATCGTTTCCGGTGAGTCCATCGCAGCACACAAGAGCATACTAGCCGCAAGGTCCCCGATCTTCATGGCCCAGTTCTTTGGCAACATGCTGGAGAGGGGCTCCCAGTGCGTGGAGATCCAGGACATGCACCCGGCCGTGTTCAAGGCCATGCTTCACTACATCTACACTGACACAGTGCCTGACCTTGGTACTGATACCACCACGGTCGAGGAGACGGCGGTGATGGCTCAGCACCTGCTTGTAGCTGCCGACATGTATGCGCTAGACAGGCTCAAGGAGATCTGCGAGGAAAGGCTCACCCGTGGCATCGGCATTGGCACGGTGGCGTCGACGCTGGCTCTAGCAGACCAGCACAACTTGGCCCAGCTCAAGGCTAAGTGCATCGACTTCATCACTGGAGGATCCAGTAAAAATCTTCTAGCCGTCTTGGAGACGGAAGGGTACAGGCATCTGGAGGCCAGCAACCCCTCGGTGTTGACGGAGCTCGTCATGGCTGCGCATGGAAAAAAGAGGAAACGATTATACGGGTAGATTCTTGAATTAGAATGGCGCATATATGGCCTGCTGCTGAGGATAATATATTATGTTCAGCCTTAATAATTTCACTCTGTATATACTATTGTTATCGTGACCAACTATAATTTGCTTGCATTTCCGAA
MAQFFGNMLERGSQCVEIQDMHPAVFKAMLHYIYTDTVPDLGTDTTTVEETAVMAQHLLVAADMYALDRLKEICEERLTR
GIGIGTVASTLALADQHNLAQLKAKCIDFITGGSSKNLLAVLETEGYRHLEASNPSVLTELVMAAHGKKRKRLYG
TATTCTGCTCCCCCGTCGTTCTCCG...
TATTCTGCTCCCCCGTCGTTCTCCGATCCCTGAGCGGCGGCCGTCTCGCTTGCGCTCTGACTCCGACCGATCTGACCGGCGGCCATCTCGCCACTGGCCACGGCGCGTCCTCCGCGGCAAGTTCTTCCAGTGCACCGTCTCAAGGTAGATGACTTCTGTGTCACCAAGTCCACGATCAGGAACAAGAAGGATTGCTGCATCAGATCCAGATGCAGCGTCGACGGATACGACTGGGAGATCCAGTTCCGCTTTTCACCTTACGAGGGCAGTCCTGAAGACTACTGGTTAGCGCTCGTGCTTGTGTACCTCGGCGCGCCGTGCGACGGCGGTGTGGCGGTGGCTCTGAGCTGTCATCTGGTAGATCAGAGCTGCGATCTTCGTGTTCCATTATTAACAACAACACAAGGTCTAAACACAACGTTTAGGCGTCCCTTGGACCGCTCTCCTCCGATTTACTTCGGCAAAGGGAAGGTTAGAGACGATGTGCAGGCAGCAGCAGCAGCTGGTCGCCCGCTAATATTCAAGGGTGGTTCATTTACTGTGGAATGCCAGATCGACGTGCACAGCAGCAGGGACTCAGATTCCGTTTCTCTGCCGTCCTCTGACCTGCACCAACACCTCGGGGAGCTCTTGCGGAACCAGTCTGGTGCAGACGTTACCTTCATCGTTTCCGGTGAGTCCATCGCAGCACACAAGAGCATACTAGCCGCAAGGTCCCCGATCTTCATGGCCCAGTTCTTTGGCAACATGCTGGAGAGGGGCTCCCAGTGCGTGGAGATCCAGGACATGCACCCGGCCGTGTTCAAGGCCATGCTTCACTACATCTACACTGACACAGTGCCTGACCTTGGTACTGATACCACCACGGTCGAGGAGACGGCGGTGATGGCTCAGCACCTGCTTGTAGCTGCCGACATGTATGCGCTAGACAGGCTCAAGGAGATCTGCGAGGAAAGGCTCACCCGTGGCATCGGCATTGGCACGGTGGCGTCGACGCTGGCTCTAGCAGACCAGCACAACTTGGCCCAGCTCAAGGCTAAGTGCATCGACTTCATCACTGGAGGATCCAGTAAAAATCTTCTAGCCGTCTTGGAGACGGAAGGGTACAGGCATCTGGAGGCCAGCAACCCCTCGGTGTTGACGGAGCTCGTCATGGCTGCGCATGGAAAAAAGAGGAAACGATTATACGGGTAGATTCTTGAATTAGAATGGCGCATATATGGCCTGCTGCTGAGGATAATATATTATGTTCAGCCTTAATAATTTCACTCTGTATATACTATTGTTATCGTGACCAACTATAATTTGCTTGCATTTCCGAA
MTHTCTHLIANVCSVHRLKVDDFCVTKSTIRNKKDCCIRSRCSVDGYDWEIQFRFSPYEGSPEDYWLALVLVYLGAPCDG
GVAVALSCHLVDQSCDLRVPLLTTTQGLNTTFRRPLDRSPPIYFGKGKVRDDVQAAAAAGRPLIFKGGSFTVECQIDVHS
SRDSDSVSLPSSDLHQHLGELLRNQSGADVTFIVSGESIAAHKSILAARSPIFMAQFFGNMLERGSQCVEIQDMHPAVFK
AMLHYIYTDTVPDLGTDTTTVEETAVMAQHLLVAADMYALDRLKEICEERLTRGIGIGTVASTLALADQHNLAQLKAKCI
DFITGGSSKNLLAVLETEGYRHLEASNPSVLTELVMAAHGKKRKRLYG
ATGACGCACACCTGCACTCACCTCA...
ATGACGCACACCTGCACTCACCTCATCGCGAATGTCTGCTCAGTGCACCGTCTCAAGGTAGATGACTTCTGTGTCACCAAGTCCACGATCAGGAACAAGAAGGATTGCTGCATCAGATCCAGATGCAGCGTCGACGGATACGACTGGGAGATCCAGTTCCGCTTTTCACCTTACGAGGGCAGTCCTGAAGACTACTGGTTAGCGCTCGTGCTTGTGTACCTCGGCGCGCCGTGCGACGGCGGTGTGGCGGTGGCTCTGAGCTGTCATCTGGTAGATCAGAGCTGCGATCTTCGTGTTCCATTATTAACAACAACACAAGGTCTAAACACAACGTTTAGGCGTCCCTTGGACCGCTCTCCTCCGATTTACTTCGGCAAAGGGAAGGTTAGAGACGATGTGCAGGCAGCAGCAGCAGCTGGTCGCCCGCTAATATTCAAGGGTGGTTCATTTACTGTGGAATGCCAGATCGACGTGCACAGCAGCAGGGACTCAGATTCCGTTTCTCTGCCGTCCTCTGACCTGCACCAACACCTCGGGGAGCTCTTGCGGAACCAGTCTGGTGCAGACGTTACCTTCATCGTTTCCGGTGAGTCCATCGCAGCACACAAGAGCATACTAGCCGCAAGGTCCCCGATCTTCATGGCCCAGTTCTTTGGCAACATGCTGGAGAGGGGCTCCCAGTGCGTGGAGATCCAGGACATGCACCCGGCCGTGTTCAAGGCCATGCTTCACTACATCTACACTGACACAGTGCCTGACCTTGGTACTGATACCACCACGGTCGAGGAGACGGCGGTGATGGCTCAGCACCTGCTTGTAGCTGCCGACATGTATGCGCTAGACAGGCTCAAGGAGATCTGCGAGGAAAGGCTCACCCGTGGCATCGGCATTGGCACGGTGGCGTCGACGCTGGCTCTAGCAGACCAGCACAACTTGGCCCAGCTCAAGGCTAAGTGCATCGACTTCATCACTGGAGGATCCAGTAAAAATCTTCTAGCCGTCTTGGAGACGGAAGGGTACAGGCATCTGGAGGCCAGCAACCCCTCGGTGTTGACGGAGCTCGTCATGGCTGCGCATGGAAAAAAGAGGAAACGATTATACGGGTAG
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